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Research unit
SIB
Project number
2153-055546
Project title
The Anataxis project: reconstructing the Tree of Life with a new computerised parallel approach

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Short description
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Project aims
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Key words
(English)
Databases, parallel computing, Anataxis, bioinformatics, tree of life, phylogenetics, Swiss-Prot, Swiss Intitute of Bioinformatics
Short description
(English)

Structuring the content of huge, rapidly growing genetic databases of molecular sequences according to the biological rules of evolution and phylogenetics, is a major scientific challenge. Phylogenetic reconstitution is a very difficult algorithmic problem which still requires fundamental research in computer science. Developments in other more or less related fields, such as clustering and classification, are neither entirely applicable in, nor easily adapted to this fundamental field of bioinformatics. Therefore, we are developing a radically new approach, Anâtaxis, which avoids the artefacts created by existing methods and will be capable of processing very large amounts of data.

Project aims
(English)
reconstructing the Tree of Life with a new computerised parallel approach