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Research unit
COST
Project number
C01.0025
Project title
Chemistry and biochemistry of the B12 coenzymes

Texts for this project

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Key words
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Research programs
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Short description
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Further information
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Partners and International Organizations
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Abstract
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References in databases
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Inserted texts


CategoryText
Key words
(English)
Glutamate mutase model; guanidinium receptor; isothermal titration calorimetry; coenzyme B12 enzymes
Research programs
(English)
COST-Action D21 - Metalloenzymes and Chemical Biomimetics
Short description
(English)
See abstract
Further information
(English)
Full name of research-institution/enterprise: Universität Bern Departement für Chemie und Biochemie
Partners and International Organizations
(English)
A, B, CZ, DK, FIN, F, D, GR, H, IRL, I, IL, MT, NL, N, PL, P, E, S, CH, GB
Abstract
(English)
Glutamate mutase is a coenzyme B12 dependent enzyme that catalyses the conversion of (S)-glutamate to (2S,3S)-3-methylaspartate, a reaction which represents the first step in the fermentation of glutamate to acetate and butyrate in many clostridia. The active site of the enzyme contains three arginine residues that interact with the carboxylate groups of the substrate. The rearrangement has no precedent in organic chemistry therefore making the development of models relevant. New receptors for dicarboxylates containing three guanidinium groups were prepared. The new compounds mimic the espace arrangement of arginine groups in the active site of the B12-dependent enzyme. Binding studies were carried out with the new receptors in order investigate the binding abilities of the model substrate-active site mimic. Isothermal titration calorimetry was used to determine the stoichiometry and the association constant of the trisguanidinium receptors to dicarboxylates (L-glutamate, glutarate, trans-glutaconate) and citrate. The model compounds are able to bind two molecules of dicarboxylates. The strength of binding depends on the relative orientation of the guanidinium groups.
References in databases
(English)
Swiss Database: COST-DB of the State Secretariat for Education and Research Hallwylstrasse 4 CH-3003 Berne, Switzerland Tel. +41 31 322 74 82 Swiss Project-Number: C01.0025